carate package

Subpackages

• carate.cli package
  • Submodules
  • carate.cli.automate module
    • start_run()
    • train_whole_directory()
  • Module contents
• carate.config_adapter package
  • Submodules
  • carate.config_adapter.config module
    • Config
    • ConfigInitializer
      • ConfigInitializer.from_file()
      • ConfigInitializer.from_json()
    • EvaluationMap
    • ModelMap
  • Module contents
• carate.dataset package
  • Submodules
  • carate.dataset.qm9 module
  • Module contents
• carate.evaluation package
  • Submodules
  • carate.evaluation.base module
    • Evaluation
      • Evaluation.cv()
      • Evaluation.load_model_checkpoint()
      • Evaluation.name
      • Evaluation.save_model_checkpoint()
      • Evaluation.save_result()
      • Evaluation.save_whole_checkpoint()
      • Evaluation.test()
      • Evaluation.train()
  • carate.evaluation.classification module
    • ClassificationEvaluation
  • carate.evaluation.classification_whole_dataset module
  • carate.evaluation.regression module
    • RegressionEvaluation
      • RegressionEvaluation.cv()
      • RegressionEvaluation.test()
      • RegressionEvaluation.train()
  • Module contents
• carate.loader package
  • Submodules
  • carate.loader.load_data module
    • DatasetObject
      • DatasetObject.load_data()
    • StandardDatasetMoleculeNet
      • StandardDatasetMoleculeNet.DataSet
    • StandardDatasetTUDataset
      • StandardDatasetTUDataset.DataSet
    • StandardPytorchGeometricDataset
      • StandardPytorchGeometricDataset.DataSet
      • StandardPytorchGeometricDataset.load_data()
      • StandardPytorchGeometricDataset.make_split()
  • Module contents
• carate.logging package
  • Submodules
  • carate.logging.metrics_logger module
    • MetricsLogger
      • MetricsLogger.basic_layout()
      • MetricsLogger.close_logger()
      • MetricsLogger.log()
  • Module contents
• carate.models package
  • Submodules
  • carate.models.base_model module
    • Model
      • Model.forward()
  • carate.models.cc_classification module
    • Net
      • Net.forward()
  • carate.models.cc_regression module
    • Net
      • Net.forward()
  • carate.models.cgc_classification module
    • Net
      • Net.forward()
  • carate.models.cgc_classification_jax module
  • carate.models.cgc_regression module
    • Net
      • Net.forward()
  • carate.models.cgc_regression_jax module
  • carate.models.g_classification module
    • Net
      • Net.forward()
  • carate.models.g_regression module
    • Net
      • Net.forward()
  • carate.models.gatv2_classification module
    • Net
      • Net.forward()
  • carate.models.gatv2_regression module
    • Net
      • Net.forward()
  • carate.models.gcc_classification module
    • Net
      • Net.forward()
  • carate.models.gcc_regression module
    • Net
      • Net.forward()
  • carate.models.graph_transformer_classification module
    • Net
      • Net.forward()
  • carate.models.graph_transformer_regression module
    • Net
      • Net.forward()
  • Module contents
• carate.optimizer package
  • Submodules
  • carate.optimizer.optimizer module
    • get_optimizer()
  • Module contents
• carate.plotting package
  • Submodules
  • carate.plotting.base_plots module
    • load_result_json_old_format()
    • parse_min_max_avg()
    • parse_old_file_format_for_plot()
    • plot_range_band_multi()
    • plot_range_band_single()
    • plot_range_fill()
    • plot_trajectory_single_algorithm()
    • save_publication_graphic()
  • carate.plotting.multi_run module
    • ploat_range_band_multi_val()
    • plot_all_runs_in_dir()
    • plot_range_band_multi_run()
    • prepare_plot_multi()
  • Module contents
• carate.runner package
  • Submodules
  • carate.runner.run module
    • Run
      • Run.run()
    • RunInitializer
      • RunInitializer.from_file()
      • RunInitializer.from_json()
  • Module contents
• carate.statistics package
  • Submodules
  • carate.statistics.analysis module
    • get_avg()
    • get_max()
    • get_max_average()
    • get_min()
    • get_min_average()
    • get_min_max_avg_cv_run()
    • get_stacked_list()
    • load_result_json()
    • unpack_run()
  • Module contents
• carate.utils package
  • Submodules
  • carate.utils.convert_to_json module
    • convert_py_to_json()
    • read_file()
    • sanitize_raw_py()
  • carate.utils.model_files module
    • get_latest_checkpoint()
    • load_model()
    • load_model_parameters()
    • load_model_training_checkpoint()
    • save_model()
    • save_model_parameters()
    • save_model_training_checkpoint()
  • carate.utils.training_result_parser module
    • get_accuracy()
    • get_auc()
    • get_loss_json()
    • load_training_from_json_file()
  • Module contents

Submodules

carate.default_interface module

Default Interface defining the Base object for all other objects. Especially the __get_default_method is provided for all base objects.

author:

Julian M. Kleber

class carate.default_interface.DefaultObject

Bases: object

The default object provides methods every class needs on top of the standard Python functionality.

carate.main module

Module contents